[INFO] fetching crate bio-jtools 2021.1.21...
[INFO] building bio-jtools-2021.1.21 against master#881c1ac408d93bb7adaa3a51dabab9266e82eee8 for issue-85264
[INFO] extracting crate bio-jtools 2021.1.21 into /workspace/builds/worker-7/source
[INFO] validating manifest of crates.io crate bio-jtools 2021.1.21 on toolchain 881c1ac408d93bb7adaa3a51dabab9266e82eee8
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bio-jtools 2021.1.21
[INFO] finished tweaking crates.io crate bio-jtools 2021.1.21
[INFO] tweaked toml for crates.io crate bio-jtools 2021.1.21 written to /workspace/builds/worker-7/source/Cargo.toml
[INFO] crate crates.io crate bio-jtools 2021.1.21 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rust-lapper v0.4.4
[INFO] [stderr]   Downloaded bam v0.1.1
[INFO] [stderr]   Downloaded needletail v0.4.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6de72a7abfdbdad753505a6134030195d0c8a5981e6f73107929f9184a907d6e
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "6de72a7abfdbdad753505a6134030195d0c8a5981e6f73107929f9184a907d6e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6de72a7abfdbdad753505a6134030195d0c8a5981e6f73107929f9184a907d6e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6de72a7abfdbdad753505a6134030195d0c8a5981e6f73107929f9184a907d6e", kill_on_drop: false }`
[INFO] [stdout] 6de72a7abfdbdad753505a6134030195d0c8a5981e6f73107929f9184a907d6e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] db32b9ae890632aa2f759b1c8f9d168f41182587172be5448db6595c4115e951
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "db32b9ae890632aa2f759b1c8f9d168f41182587172be5448db6595c4115e951", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.3.0
[INFO] [stderr]    Compiling cc v1.0.50
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling adler32 v1.0.4
[INFO] [stderr]    Compiling syn v1.0.14
[INFO] [stderr]    Compiling ryu v1.0.2
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling unindent v0.1.5
[INFO] [stderr]    Compiling safemem v0.3.3
[INFO] [stderr]    Compiling bytecount v0.6.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling encode_unicode v0.3.6
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling rust-lapper v0.4.4
[INFO] [stderr]    Compiling num-traits v0.2.11
[INFO] [stderr]    Compiling miniz_oxide v0.3.6
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.8
[INFO] [stderr]    Compiling dirs v1.0.5
[INFO] [stderr]    Compiling regex-automata v0.1.8
[INFO] [stderr]    Compiling term v0.5.2
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling csv-core v0.1.6
[INFO] [stderr]    Compiling aho-corasick v0.7.8
[INFO] [stderr]    Compiling buf_redux v0.8.4
[INFO] [stderr]    Compiling bstr v0.2.11
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]    Compiling flate2 v1.0.13
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling bzip2-sys v0.1.8+1.0.8
[INFO] [stderr]    Compiling bam v0.1.1
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling chrono v0.4.11
[INFO] [stderr]    Compiling xz2 v0.1.6
[INFO] [stderr]    Compiling bzip2 v0.3.3
[INFO] [stderr]    Compiling prettytable-rs v0.8.0
[INFO] [stderr]    Compiling needletail v0.4.0
[INFO] [stderr]    Compiling indoc-impl v0.3.5
[INFO] [stderr]    Compiling indoc v0.3.5
[INFO] [stderr]    Compiling bio-jtools v2021.1.21 (/opt/rustwide/workdir)
[INFO] [stdout] warning: associated function is never used: `date`
[INFO] [stdout]    --> src/data/mod.rs:106:12
[INFO] [stdout]     |
[INFO] [stdout] 106 |     pub fn date(&self) -> Date {
[INFO] [stdout]     |            ^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `instrument`
[INFO] [stdout]    --> src/data/mod.rs:111:12
[INFO] [stdout]     |
[INFO] [stdout] 111 |     pub fn instrument(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `run`
[INFO] [stdout]    --> src/data/mod.rs:116:12
[INFO] [stdout]     |
[INFO] [stdout] 116 |     pub fn run(&self) -> u8 {
[INFO] [stdout]     |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `position`
[INFO] [stdout]    --> src/data/mod.rs:121:12
[INFO] [stdout]     |
[INFO] [stdout] 121 |     pub fn position(&self) -> char {
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `flowcell`
[INFO] [stdout]    --> src/data/mod.rs:126:12
[INFO] [stdout]     |
[INFO] [stdout] 126 |     pub fn flowcell(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `description`
[INFO] [stdout]    --> src/data/mod.rs:131:12
[INFO] [stdout]     |
[INFO] [stdout] 131 |     pub fn description(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: panic message is not a string literal
[INFO] [stdout]    --> src/utils/mod.rs:100:20
[INFO] [stdout]     |
[INFO] [stdout] 100 | ...c!(format!("Could not parse HTS file type from path. Supported file extensions are (excluding compression): {:?}", SUPPORTED_EXTENSIONS...
[INFO] [stdout]     |       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_fmt_panic)]` on by default
[INFO] [stdout]     = note: this is no longer accepted in Rust 2021
[INFO] [stdout]     = note: the panic!() macro supports formatting, so there's no need for the format!() macro here
[INFO] [stdout] help: remove the `format!(..)` macro call
[INFO] [stdout]     |
[INFO] [stdout] 100 |             panic!("Could not parse HTS file type from path. Supported file extensions are (excluding compression): {:?}", SUPPORTED_EXTENSIONS);
[INFO] [stdout]     |                   --                                                                                                                          --
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 7 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 57.68s
[INFO] running `Command { std: "docker" "inspect" "db32b9ae890632aa2f759b1c8f9d168f41182587172be5448db6595c4115e951", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "db32b9ae890632aa2f759b1c8f9d168f41182587172be5448db6595c4115e951", kill_on_drop: false }`
[INFO] [stdout] db32b9ae890632aa2f759b1c8f9d168f41182587172be5448db6595c4115e951
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2b9de9ad137fa77ff6fccb6f4592ab956528b085e166c833d20532ba0768dd42
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "2b9de9ad137fa77ff6fccb6f4592ab956528b085e166c833d20532ba0768dd42", kill_on_drop: false }`
[INFO] [stderr]    Compiling bio-jtools v2021.1.21 (/opt/rustwide/workdir)
[INFO] [stdout] warning: associated function is never used: `date`
[INFO] [stdout]    --> src/data/mod.rs:106:12
[INFO] [stdout]     |
[INFO] [stdout] 106 |     pub fn date(&self) -> Date {
[INFO] [stdout]     |            ^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `instrument`
[INFO] [stdout]    --> src/data/mod.rs:111:12
[INFO] [stdout]     |
[INFO] [stdout] 111 |     pub fn instrument(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `run`
[INFO] [stdout]    --> src/data/mod.rs:116:12
[INFO] [stdout]     |
[INFO] [stdout] 116 |     pub fn run(&self) -> u8 {
[INFO] [stdout]     |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `position`
[INFO] [stdout]    --> src/data/mod.rs:121:12
[INFO] [stdout]     |
[INFO] [stdout] 121 |     pub fn position(&self) -> char {
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `flowcell`
[INFO] [stdout]    --> src/data/mod.rs:126:12
[INFO] [stdout]     |
[INFO] [stdout] 126 |     pub fn flowcell(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `description`
[INFO] [stdout]    --> src/data/mod.rs:131:12
[INFO] [stdout]     |
[INFO] [stdout] 131 |     pub fn description(&self) -> &str {
[INFO] [stdout]     |            ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: panic message is not a string literal
[INFO] [stdout]    --> src/utils/mod.rs:100:20
[INFO] [stdout]     |
[INFO] [stdout] 100 | ...c!(format!("Could not parse HTS file type from path. Supported file extensions are (excluding compression): {:?}", SUPPORTED_EXTENSIONS...
[INFO] [stdout]     |       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_fmt_panic)]` on by default
[INFO] [stdout]     = note: this is no longer accepted in Rust 2021
[INFO] [stdout]     = note: the panic!() macro supports formatting, so there's no need for the format!() macro here
[INFO] [stdout] help: remove the `format!(..)` macro call
[INFO] [stdout]     |
[INFO] [stdout] 100 |             panic!("Could not parse HTS file type from path. Supported file extensions are (excluding compression): {:?}", SUPPORTED_EXTENSIONS);
[INFO] [stdout]     |                   --                                                                                                                          --
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 7 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.35s
[INFO] running `Command { std: "docker" "inspect" "2b9de9ad137fa77ff6fccb6f4592ab956528b085e166c833d20532ba0768dd42", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2b9de9ad137fa77ff6fccb6f4592ab956528b085e166c833d20532ba0768dd42", kill_on_drop: false }`
[INFO] [stdout] 2b9de9ad137fa77ff6fccb6f4592ab956528b085e166c833d20532ba0768dd42
